Other projects besides the Data Hub I’ve been working on. The links lead you to the Github repositories of the projects.

  • EMBL-Tools – Simple Jupyter Notebook based UI for the EMBL webservices (eg. ClustalO, NCBI BLAST)
  • EMBL-Tools-jl – A JupyterLab extension to provide launcher icons for the EMBL-Tools.
  • SoS kernel collection – a collection of language modules for the Script of Scripts Jupyter kernel. Allows the use of polyglot Jupyter Notebook
  • Bioviz – Python 3 library for Bioinformatics and Computational Biology visualizations.
  • JupyterLab Bookmarks – A JupyterLab Extension to provide bookmarks in the Launcher.